This query no longer produces a plot as described. It now lists the numerical data enabling you to produce a plot.

The Results …

This query produces comma separated data which can be easily imported into most spreadsheets, graphing, statistical or mathematics software.

Genome query for

2D Plots of ORF characteristics

These plots can be generated for proteins within a genome, or for homologous proteins between genomes.
You can examine, for instance, the relationship between a protein's length and the strength of its match to something in the database, or you can view pI vs. hydrophobicity, etc.
Between genomes, are homologous proteins smaller in one than the other? More acidic?
more information...

Choose a BLASTP cutoff e-value (1.0e-300 to 1.0e-3): 1.0e-
(You cannot select a range of BLASTP cutoff e-values for this analysis.)
(only used to find matching ORFs in an intergenomic plotting):

Choose a genome:

And choose the character to plot:

Against the character:

From the same (or homologous, if plot is intergenomic) ORFs in:

Here is the list of "NCBI classifications" for each of the sequenced genomes.