Genomes …

Genomes are grouped by domain in the pop-up menus. First the Bacteria are listed, then the Archaea and then Eukaryota.

Within each domain genomes are listed in alphabetical order.

Genome query for

Mean value for chosen characteristic

Here, we calculate the mean value of a characteristic from a collection of ORFs. You may, for instance, find ORFs which are lineage-specific, then have this analysis determine their mean length, hydrophobicity, molecular weight, etc. This query may also be used to produce a cut of ORFs whose characteristic falls within or outside of a specified range of values.
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Choose a BLASTP cutoff e-value (1.0e-300 to 1.0e-3): 1.0e-
(Relevant only for the options: number of archaeal/bacterial/eukaryal genomes reciprocally best matched. You may not select a range of BLASTP cutoff e-values for this analysis.)

Choose a genome:

Choose the character:

Minimum value to consider:
Maximum value to consider:

ORFs falling within the above range
ORFs falling outside of the above range